STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM33131.1Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family. (469 aa)    
Predicted Functional Partners:
SHN47818.1
Predicted amidophosphoribosyltransferases.
   
    0.946
SHN05480.1
Prephenate dehydrogenase.
  
    0.840
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.837
SHN32644.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
   
  
 0.836
SHN46895.1
Thiol-disulfide isomerase or thioredoxin.
   
    0.831
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.829
SHN46891.1
Adenine phosphoribosyltransferase.
   
    0.829
SHN27321.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.807
SHM35756.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
  
 0.796
SHM43436.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
   
 0.762
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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