STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM46404.1Protein N-acetyltransferase, RimJ/RimL family. (254 aa)    
Predicted Functional Partners:
SHN27321.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.780
SHM46360.1
Uncharacterized HhH-GPD family protein.
       0.773
SHM37637.1
Glutamate synthase (NADH) large subunit.
   
 
 0.724
SHM67203.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.652
SHM98711.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.652
SHN74032.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.641
SHN47444.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.641
SHM98816.1
Lysine N6-hydroxylase.
  
 
 0.640
SHN46283.1
L-ornithine N5-oxygenase.
  
 
 0.640
SHN47321.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.611
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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