STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM49973.1Xaa-Pro aminopeptidase. (500 aa)    
Predicted Functional Partners:
SHN45823.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.866
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.832
SHN48136.1
Creatinine amidohydrolase.
    
  0.677
SHN35782.1
IMP dehydrogenase.
 
 
   0.670
SHN75070.1
Glycine/D-amino acid oxidase.
  
 
 0.649
SHN43519.1
Thioredoxin reductase.
    
  0.633
SHN45824.1
Sarcosine oxidase, monomeric form.
  
 
 0.622
SHN45812.1
Glycine/D-amino acid oxidase.
  
 
 0.622
SHM70117.1
Phenazine biosynthesis protein phzE.
  
 
  0.617
SHN27679.1
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.614
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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