STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN04131.1MFS transporter, CP family, cyanate transporter. (415 aa)    
Predicted Functional Partners:
SHM42139.1
Hypothetical protein; Belongs to the UPF0246 family.
  
    0.827
SHN04091.1
Predicted branched-chain amino acid permease (azaleucine resistance).
       0.486
SHN04109.1
Branched-chain amino acid transport protein (AzlD).
       0.486
SHN46196.1
Predicted arabinose efflux permease, MFS family.
 
  
  0.480
SHN41950.1
MFS transporter, NNP family, nitrate/nitrite transporter.
    
  0.462
SHN47420.1
MFS transporter, DHA1 family, chloramphenicol resistance protein.
  
     0.411
SHM69524.1
MFS transporter, DHA1 family, inner membrane transport protein.
  
     0.407
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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