Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM97600.1 | SHN03004.1 | SAMN05443668_102382 | SAMN05443668_102625 | Serine protease, subtilisin family. | Type VII secretion-associated serine protease mycosin. | 0.762 |
SHM97600.1 | SHN03445.1 | SAMN05443668_102382 | SAMN05443668_102647 | Serine protease, subtilisin family. | Subtilase family protein. | 0.758 |
SHM97600.1 | SHN04975.1 | SAMN05443668_102382 | SAMN05443668_102721 | Serine protease, subtilisin family. | Hypothetical protein. | 0.745 |
SHN03004.1 | SHM97600.1 | SAMN05443668_102625 | SAMN05443668_102382 | Type VII secretion-associated serine protease mycosin. | Serine protease, subtilisin family. | 0.762 |
SHN03004.1 | SHN04975.1 | SAMN05443668_102625 | SAMN05443668_102721 | Type VII secretion-associated serine protease mycosin. | Hypothetical protein. | 0.802 |
SHN03322.1 | SHN03377.1 | SAMN05443668_102640 | SAMN05443668_102643 | WXG100 family type VII secretion target; Belongs to the WXG100 family. | Type VII secretion integral membrane protein EccD. | 0.616 |
SHN03322.1 | SHN04975.1 | SAMN05443668_102640 | SAMN05443668_102721 | WXG100 family type VII secretion target; Belongs to the WXG100 family. | Hypothetical protein. | 0.958 |
SHN03322.1 | SHN75448.1 | SAMN05443668_102640 | SAMN05443668_107299 | WXG100 family type VII secretion target; Belongs to the WXG100 family. | Type VII secretion integral membrane protein EccD. | 0.443 |
SHN03377.1 | SHN03322.1 | SAMN05443668_102643 | SAMN05443668_102640 | Type VII secretion integral membrane protein EccD. | WXG100 family type VII secretion target; Belongs to the WXG100 family. | 0.616 |
SHN03377.1 | SHN03445.1 | SAMN05443668_102643 | SAMN05443668_102647 | Type VII secretion integral membrane protein EccD. | Subtilase family protein. | 0.520 |
SHN03377.1 | SHN04975.1 | SAMN05443668_102643 | SAMN05443668_102721 | Type VII secretion integral membrane protein EccD. | Hypothetical protein. | 0.946 |
SHN03377.1 | SHN75430.1 | SAMN05443668_102643 | SAMN05443668_107295 | Type VII secretion integral membrane protein EccD. | Subtilase family protein. | 0.691 |
SHN03445.1 | SHM97600.1 | SAMN05443668_102647 | SAMN05443668_102382 | Subtilase family protein. | Serine protease, subtilisin family. | 0.758 |
SHN03445.1 | SHN03377.1 | SAMN05443668_102647 | SAMN05443668_102643 | Subtilase family protein. | Type VII secretion integral membrane protein EccD. | 0.520 |
SHN03445.1 | SHN04975.1 | SAMN05443668_102647 | SAMN05443668_102721 | Subtilase family protein. | Hypothetical protein. | 0.802 |
SHN04863.1 | SHN04888.1 | SAMN05443668_102716 | SAMN05443668_102717 | Protein of unknown function. | Bifunctional DNA primase/polymerase, N-terminal. | 0.909 |
SHN04863.1 | SHN04975.1 | SAMN05443668_102716 | SAMN05443668_102721 | Protein of unknown function. | Hypothetical protein. | 0.777 |
SHN04888.1 | SHN04863.1 | SAMN05443668_102717 | SAMN05443668_102716 | Bifunctional DNA primase/polymerase, N-terminal. | Protein of unknown function. | 0.909 |
SHN04888.1 | SHN04975.1 | SAMN05443668_102717 | SAMN05443668_102721 | Bifunctional DNA primase/polymerase, N-terminal. | Hypothetical protein. | 0.762 |
SHN04975.1 | SHM97600.1 | SAMN05443668_102721 | SAMN05443668_102382 | Hypothetical protein. | Serine protease, subtilisin family. | 0.745 |
page 1 of 2