Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN05756.1 | SHN05777.1 | SAMN05443668_102758 | SAMN05443668_102759 | Hypothetical protein. | Spore coat protein A. | 0.799 |
SHN05756.1 | SHN05808.1 | SAMN05443668_102758 | SAMN05443668_102760 | Hypothetical protein. | Protein of unknown function. | 0.453 |
SHN05756.1 | SHN05826.1 | SAMN05443668_102758 | SAMN05443668_102761 | Hypothetical protein. | Uncharacterized conserved protein, DUF1501 family. | 0.450 |
SHN05777.1 | SHN05756.1 | SAMN05443668_102759 | SAMN05443668_102758 | Spore coat protein A. | Hypothetical protein. | 0.799 |
SHN05777.1 | SHN05808.1 | SAMN05443668_102759 | SAMN05443668_102760 | Spore coat protein A. | Protein of unknown function. | 0.453 |
SHN05777.1 | SHN05826.1 | SAMN05443668_102759 | SAMN05443668_102761 | Spore coat protein A. | Uncharacterized conserved protein, DUF1501 family. | 0.450 |
SHN05808.1 | SHN05756.1 | SAMN05443668_102760 | SAMN05443668_102758 | Protein of unknown function. | Hypothetical protein. | 0.453 |
SHN05808.1 | SHN05777.1 | SAMN05443668_102760 | SAMN05443668_102759 | Protein of unknown function. | Spore coat protein A. | 0.453 |
SHN05808.1 | SHN05826.1 | SAMN05443668_102760 | SAMN05443668_102761 | Protein of unknown function. | Uncharacterized conserved protein, DUF1501 family. | 0.958 |
SHN05808.1 | SHN38287.1 | SAMN05443668_102760 | SAMN05443668_10641 | Protein of unknown function. | Caspase domain-containing protein. | 0.420 |
SHN05826.1 | SHN05756.1 | SAMN05443668_102761 | SAMN05443668_102758 | Uncharacterized conserved protein, DUF1501 family. | Hypothetical protein. | 0.450 |
SHN05826.1 | SHN05777.1 | SAMN05443668_102761 | SAMN05443668_102759 | Uncharacterized conserved protein, DUF1501 family. | Spore coat protein A. | 0.450 |
SHN05826.1 | SHN05808.1 | SAMN05443668_102761 | SAMN05443668_102760 | Uncharacterized conserved protein, DUF1501 family. | Protein of unknown function. | 0.958 |
SHN05826.1 | SHN38287.1 | SAMN05443668_102761 | SAMN05443668_10641 | Uncharacterized conserved protein, DUF1501 family. | Caspase domain-containing protein. | 0.423 |
SHN38287.1 | SHN05808.1 | SAMN05443668_10641 | SAMN05443668_102760 | Caspase domain-containing protein. | Protein of unknown function. | 0.420 |
SHN38287.1 | SHN05826.1 | SAMN05443668_10641 | SAMN05443668_102761 | Caspase domain-containing protein. | Uncharacterized conserved protein, DUF1501 family. | 0.423 |