Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN12980.1 | SHN12991.1 | SAMN05443668_10355 | SAMN05443668_10356 | Hypothetical protein. | Hypothetical protein. | 0.613 |
SHN12980.1 | SHN13000.1 | SAMN05443668_10355 | SAMN05443668_10357 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily. | 0.613 |
SHN12980.1 | SHN13012.1 | SAMN05443668_10355 | SAMN05443668_10358 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.475 |
SHN12980.1 | SHN13023.1 | SAMN05443668_10355 | SAMN05443668_10359 | Hypothetical protein. | Uncharacterized conserved protein. | 0.461 |
SHN12991.1 | SHN12980.1 | SAMN05443668_10356 | SAMN05443668_10355 | Hypothetical protein. | Hypothetical protein. | 0.613 |
SHN12991.1 | SHN13000.1 | SAMN05443668_10356 | SAMN05443668_10357 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily. | 0.773 |
SHN12991.1 | SHN13012.1 | SAMN05443668_10356 | SAMN05443668_10358 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.590 |
SHN12991.1 | SHN13023.1 | SAMN05443668_10356 | SAMN05443668_10359 | Hypothetical protein. | Uncharacterized conserved protein. | 0.571 |
SHN12991.1 | SHN13039.1 | SAMN05443668_10356 | SAMN05443668_10360 | Hypothetical protein. | Serine/threonine protein kinase. | 0.408 |
SHN13000.1 | SHN12980.1 | SAMN05443668_10357 | SAMN05443668_10355 | Drug resistance transporter, EmrB/QacA subfamily. | Hypothetical protein. | 0.613 |
SHN13000.1 | SHN12991.1 | SAMN05443668_10357 | SAMN05443668_10356 | Drug resistance transporter, EmrB/QacA subfamily. | Hypothetical protein. | 0.773 |
SHN13000.1 | SHN13012.1 | SAMN05443668_10357 | SAMN05443668_10358 | Drug resistance transporter, EmrB/QacA subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.590 |
SHN13000.1 | SHN13023.1 | SAMN05443668_10357 | SAMN05443668_10359 | Drug resistance transporter, EmrB/QacA subfamily. | Uncharacterized conserved protein. | 0.571 |
SHN13000.1 | SHN13039.1 | SAMN05443668_10357 | SAMN05443668_10360 | Drug resistance transporter, EmrB/QacA subfamily. | Serine/threonine protein kinase. | 0.408 |
SHN13012.1 | SHN12980.1 | SAMN05443668_10358 | SAMN05443668_10355 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.475 |
SHN13012.1 | SHN12991.1 | SAMN05443668_10358 | SAMN05443668_10356 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.590 |
SHN13012.1 | SHN13000.1 | SAMN05443668_10358 | SAMN05443668_10357 | RNA polymerase sigma-70 factor, ECF subfamily. | Drug resistance transporter, EmrB/QacA subfamily. | 0.590 |
SHN13012.1 | SHN13023.1 | SAMN05443668_10358 | SAMN05443668_10359 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized conserved protein. | 0.941 |
SHN13012.1 | SHN13039.1 | SAMN05443668_10358 | SAMN05443668_10360 | RNA polymerase sigma-70 factor, ECF subfamily. | Serine/threonine protein kinase. | 0.518 |
SHN13023.1 | SHN12980.1 | SAMN05443668_10359 | SAMN05443668_10355 | Uncharacterized conserved protein. | Hypothetical protein. | 0.461 |
page 1 of 2