STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN19553.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SHN44197.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.976
SHN46788.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.976
SHN33497.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.904
SHN02813.1
Helicase/secretion neighborhood CpaE-like protein.
  
 0.901
SHN42053.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
 
 0.768
SHN46049.1
Polysaccharide biosynthesis protein.
  
 
 0.728
SHN46361.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.727
SHM72812.1
ABC-2 type transport system permease protein.
  
  
 0.567
SHM96477.1
Oleandomycin transport system permease protein.
  
  
 0.567
SHN47147.1
ABC-2 type transport system permease protein.
  
  
 0.567
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.