STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN20917.1Type IV pilus assembly protein PilM. (340 aa)    
Predicted Functional Partners:
SHN20926.1
Hypothetical protein.
  
 0.999
SHN20893.1
Type IV pilus assembly protein PilC.
 
 
 
 0.994
SHN20875.1
Type IV pilus assembly protein PilB.
 
 
 0.992
SHN20933.1
Tfp pilus assembly protein PilO.
  
 
 0.985
SHN20909.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.964
SHN20901.1
Type IV pilus assembly protein PilA.
 
  
 0.960
SHN20885.1
Twitching motility protein PilT.
 
   
 0.950
SHN20941.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
     0.858
SHN20958.1
Ricin-type beta-trefoil lectin domain-containing protein.
     
 0.839
SHN20950.1
Hypothetical protein.
  
  
 0.835
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.