Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN25497.1 | SHN25508.1 | SAMN05443668_104169 | SAMN05443668_104170 | Antibiotic biosynthesis monooxygenase. | Hypothetical protein. | 0.559 |
SHN25497.1 | SHN25524.1 | SAMN05443668_104169 | SAMN05443668_104171 | Antibiotic biosynthesis monooxygenase. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.477 |
SHN25497.1 | SHN25535.1 | SAMN05443668_104169 | SAMN05443668_104172 | Antibiotic biosynthesis monooxygenase. | Zinc transport system ATP-binding protein. | 0.483 |
SHN25497.1 | SHN25546.1 | SAMN05443668_104169 | SAMN05443668_104173 | Antibiotic biosynthesis monooxygenase. | Zinc transport system permease protein. | 0.476 |
SHN25508.1 | SHN25497.1 | SAMN05443668_104170 | SAMN05443668_104169 | Hypothetical protein. | Antibiotic biosynthesis monooxygenase. | 0.559 |
SHN25508.1 | SHN25524.1 | SAMN05443668_104170 | SAMN05443668_104171 | Hypothetical protein. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.517 |
SHN25508.1 | SHN25535.1 | SAMN05443668_104170 | SAMN05443668_104172 | Hypothetical protein. | Zinc transport system ATP-binding protein. | 0.517 |
SHN25508.1 | SHN25546.1 | SAMN05443668_104170 | SAMN05443668_104173 | Hypothetical protein. | Zinc transport system permease protein. | 0.517 |
SHN25508.1 | SHN25561.1 | SAMN05443668_104170 | SAMN05443668_104174 | Hypothetical protein. | DNA-binding transcriptional regulator, ArsR family. | 0.517 |
SHN25524.1 | SHN25497.1 | SAMN05443668_104171 | SAMN05443668_104169 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Antibiotic biosynthesis monooxygenase. | 0.477 |
SHN25524.1 | SHN25508.1 | SAMN05443668_104171 | SAMN05443668_104170 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein. | 0.517 |
SHN25524.1 | SHN25535.1 | SAMN05443668_104171 | SAMN05443668_104172 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Zinc transport system ATP-binding protein. | 0.997 |
SHN25524.1 | SHN25546.1 | SAMN05443668_104171 | SAMN05443668_104173 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Zinc transport system permease protein. | 0.997 |
SHN25524.1 | SHN25561.1 | SAMN05443668_104171 | SAMN05443668_104174 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | DNA-binding transcriptional regulator, ArsR family. | 0.778 |
SHN25535.1 | SHN25497.1 | SAMN05443668_104172 | SAMN05443668_104169 | Zinc transport system ATP-binding protein. | Antibiotic biosynthesis monooxygenase. | 0.483 |
SHN25535.1 | SHN25508.1 | SAMN05443668_104172 | SAMN05443668_104170 | Zinc transport system ATP-binding protein. | Hypothetical protein. | 0.517 |
SHN25535.1 | SHN25524.1 | SAMN05443668_104172 | SAMN05443668_104171 | Zinc transport system ATP-binding protein. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.997 |
SHN25535.1 | SHN25546.1 | SAMN05443668_104172 | SAMN05443668_104173 | Zinc transport system ATP-binding protein. | Zinc transport system permease protein. | 0.999 |
SHN25535.1 | SHN25561.1 | SAMN05443668_104172 | SAMN05443668_104174 | Zinc transport system ATP-binding protein. | DNA-binding transcriptional regulator, ArsR family. | 0.778 |
SHN25546.1 | SHN25497.1 | SAMN05443668_104173 | SAMN05443668_104169 | Zinc transport system permease protein. | Antibiotic biosynthesis monooxygenase. | 0.476 |
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