STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN27859.1long-chain-acyl-CoA dehydrogenase. (381 aa)    
Predicted Functional Partners:
SHM27993.1
Electron transfer flavoprotein beta subunit.
 
 0.840
SHM28028.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.790
SHM92960.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.776
SHN75837.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.767
SHN42175.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.764
SHN48137.1
Electron transfer flavoprotein FAD-binding domain-containing protein.
 
 
 0.760
SHN46565.1
Acyl-CoA dehydrogenase.
  
     0.716
SHM25693.1
(R)-ethylmalonyl-CoA mutase.
  
 
 0.695
SHN40136.1
Acyl-CoA dehydrogenase.
  
     0.660
SHN16808.1
Acyl-CoA dehydrogenase.
  
     0.658
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
Server load: low (22%) [HD]