Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM27655.1 | SHM57610.1 | SAMN05443668_101183 | SAMN05443668_101934 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.891 |
SHM27655.1 | SHN39432.1 | SAMN05443668_101183 | SAMN05443668_106279 | Tetratricopeptide repeat-containing protein. | Serine/threonine protein kinase. | 0.810 |
SHM27655.1 | SHN47482.1 | SAMN05443668_101183 | SAMN05443668_12440 | Tetratricopeptide repeat-containing protein. | PAS domain S-box-containing protein. | 0.853 |
SHM27655.1 | SHN75054.1 | SAMN05443668_101183 | SAMN05443668_107207 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.853 |
SHM27655.1 | alaS | SAMN05443668_101183 | SAMN05443668_11178 | Tetratricopeptide repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.931 |
SHM57610.1 | SHM27655.1 | SAMN05443668_101934 | SAMN05443668_101183 | Signal transduction histidine kinase. | Tetratricopeptide repeat-containing protein. | 0.891 |
SHM57610.1 | SHM95005.1 | SAMN05443668_101934 | SAMN05443668_102288 | Signal transduction histidine kinase. | Serine/threonine protein phosphatase PrpC. | 0.477 |
SHM57610.1 | SHN38274.1 | SAMN05443668_101934 | SAMN05443668_10638 | Signal transduction histidine kinase. | Serine/threonine protein phosphatase PrpC. | 0.477 |
SHM57610.1 | SHN39432.1 | SAMN05443668_101934 | SAMN05443668_106279 | Signal transduction histidine kinase. | Serine/threonine protein kinase. | 0.859 |
SHM57610.1 | SHN46797.1 | SAMN05443668_101934 | SAMN05443668_11827 | Signal transduction histidine kinase. | Protein phosphatase. | 0.477 |
SHM57610.1 | SHN46963.1 | SAMN05443668_101934 | SAMN05443668_11959 | Signal transduction histidine kinase. | Serine/threonine protein phosphatase PrpC. | 0.947 |
SHM57610.1 | SHN47482.1 | SAMN05443668_101934 | SAMN05443668_12440 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHM57610.1 | SHN75054.1 | SAMN05443668_101934 | SAMN05443668_107207 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SHM95005.1 | SHM57610.1 | SAMN05443668_102288 | SAMN05443668_101934 | Serine/threonine protein phosphatase PrpC. | Signal transduction histidine kinase. | 0.477 |
SHM95005.1 | SHN39432.1 | SAMN05443668_102288 | SAMN05443668_106279 | Serine/threonine protein phosphatase PrpC. | Serine/threonine protein kinase. | 0.859 |
SHN38274.1 | SHM57610.1 | SAMN05443668_10638 | SAMN05443668_101934 | Serine/threonine protein phosphatase PrpC. | Signal transduction histidine kinase. | 0.477 |
SHN38274.1 | SHN39432.1 | SAMN05443668_10638 | SAMN05443668_106279 | Serine/threonine protein phosphatase PrpC. | Serine/threonine protein kinase. | 0.858 |
SHN39432.1 | SHM27655.1 | SAMN05443668_106279 | SAMN05443668_101183 | Serine/threonine protein kinase. | Tetratricopeptide repeat-containing protein. | 0.810 |
SHN39432.1 | SHM57610.1 | SAMN05443668_106279 | SAMN05443668_101934 | Serine/threonine protein kinase. | Signal transduction histidine kinase. | 0.859 |
SHN39432.1 | SHM95005.1 | SAMN05443668_106279 | SAMN05443668_102288 | Serine/threonine protein kinase. | Serine/threonine protein phosphatase PrpC. | 0.859 |
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