STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN39537.1Broad-specificity cellobiase. (464 aa)    
Predicted Functional Partners:
SHN39527.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  
 0.782
SHN39522.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
     
 0.778
SHN39533.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
     
 0.777
SHN45829.1
Hypothetical protein.
    
 0.737
SHM23511.1
Hypothetical protein.
   
   0.714
SHN42715.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
   
   0.714
SHN42624.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 0.703
SHN26808.1
Ribose 5-phosphate isomerase B.
  
 
 0.698
SHN43619.1
Tagatose 1,6-diphosphate aldolase/sulfofructosephosphate aldolase.
  
  
 0.678
SHN43598.1
Alpha-galactosidase.
  
 
 0.658
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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