STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN75014.1Predicted metal-dependent hydrolase, TIM-barrel fold. (299 aa)    
Predicted Functional Partners:
SHN75011.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
     0.882
SHN75006.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.794
SHN24994.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.768
SHN12690.1
D-threo-aldose 1-dehydrogenase.
 
 
  0.756
SHM91308.1
Cytochrome P450.
     
 0.735
SHN25024.1
L-galactose dehydrogenase.
 
 
  0.721
SHN74960.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
   
 0.695
SHN75023.1
Aldehyde dehydrogenase (NAD+).
    
  0.683
SHN75018.1
L-2-hydroxyglutarate oxidase LhgO.
       0.647
SHM68238.1
Propane monooxygenase reductase subunit.
    
 0.640
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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