STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN42618.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (289 aa)    
Predicted Functional Partners:
SHN42615.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.997
SHN42621.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.983
SHM98468.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.969
SHN47299.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.950
SHN45837.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.945
SHN29659.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.942
SHM52205.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.933
SHN47332.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.933
SHN39533.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.931
SHM53080.1
Multiple sugar transport system permease protein.
  0.929
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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