Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN34519.1 | SHN43175.1 | SAMN05443668_105276 | SAMN05443668_10964 | Glycosyl hydrolase family 36 C-terminal domain-containing protein. | Arylsulfatase. | 0.668 |
SHN36940.1 | SHN36954.1 | SAMN05443668_105593 | SAMN05443668_105595 | Haloacid dehalogenase-like hydrolase. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.876 |
SHN36940.1 | SHN43175.1 | SAMN05443668_105593 | SAMN05443668_10964 | Haloacid dehalogenase-like hydrolase. | Arylsulfatase. | 0.790 |
SHN36954.1 | SHN36940.1 | SAMN05443668_105595 | SAMN05443668_105593 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Haloacid dehalogenase-like hydrolase. | 0.876 |
SHN36954.1 | SHN43175.1 | SAMN05443668_105595 | SAMN05443668_10964 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Arylsulfatase. | 0.920 |
SHN43172.1 | SHN43175.1 | SAMN05443668_10963 | SAMN05443668_10964 | Bile acid:Na+ symporter, BASS family. | Arylsulfatase. | 0.777 |
SHN43175.1 | SHN34519.1 | SAMN05443668_10964 | SAMN05443668_105276 | Arylsulfatase. | Glycosyl hydrolase family 36 C-terminal domain-containing protein. | 0.668 |
SHN43175.1 | SHN36940.1 | SAMN05443668_10964 | SAMN05443668_105593 | Arylsulfatase. | Haloacid dehalogenase-like hydrolase. | 0.790 |
SHN43175.1 | SHN36954.1 | SAMN05443668_10964 | SAMN05443668_105595 | Arylsulfatase. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.920 |
SHN43175.1 | SHN43172.1 | SAMN05443668_10964 | SAMN05443668_10963 | Arylsulfatase. | Bile acid:Na+ symporter, BASS family. | 0.777 |
SHN43175.1 | SHN46300.1 | SAMN05443668_10964 | SAMN05443668_114134 | Arylsulfatase. | WD domain-containing protein, G-beta repeat-containing protein. | 0.628 |
SHN43175.1 | SHN47721.1 | SAMN05443668_10964 | SAMN05443668_12724 | Arylsulfatase. | Alpha-galactosidase. | 0.668 |
SHN43175.1 | egtB | SAMN05443668_10964 | SAMN05443668_104544 | Arylsulfatase. | iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. | 0.665 |
SHN43175.1 | rpoA | SAMN05443668_10964 | SAMN05443668_105492 | Arylsulfatase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.683 |
SHN43175.1 | rpoB | SAMN05443668_10964 | SAMN05443668_105530 | Arylsulfatase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.672 |
SHN43175.1 | rpoZ | SAMN05443668_10964 | SAMN05443668_11155 | Arylsulfatase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.672 |
SHN46300.1 | SHN43175.1 | SAMN05443668_114134 | SAMN05443668_10964 | WD domain-containing protein, G-beta repeat-containing protein. | Arylsulfatase. | 0.628 |
SHN46300.1 | rpoA | SAMN05443668_114134 | SAMN05443668_105492 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.951 |
SHN46300.1 | rpoB | SAMN05443668_114134 | SAMN05443668_105530 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |
SHN46300.1 | rpoZ | SAMN05443668_114134 | SAMN05443668_11155 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.689 |
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