STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN43251.1Acyl dehydratase. (153 aa)    
Predicted Functional Partners:
SHN43260.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
   0.825
SHN43257.1
Hypothetical protein.
 
     0.808
SHN29555.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.789
SHN43254.1
fatty-acyl-CoA synthase.
    
 0.781
SHN46244.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.768
SHN43269.1
Ferredoxin-NADP reductase.
  
 
 0.708
SHN27903.1
Biotin-requiring enzyme.
 
 
 0.698
SHN27321.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.672
SHM67203.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.630
SHM98711.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.630
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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