Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN29555.1 | SHN45261.1 | SAMN05443668_104583 | SAMN05443668_111222 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.664 |
SHN29555.1 | SHN45267.1 | SAMN05443668_104583 | SAMN05443668_111225 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.641 |
SHN29555.1 | SHN45269.1 | SAMN05443668_104583 | SAMN05443668_111226 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | Cytochrome P450. | 0.960 |
SHN29555.1 | SHN46277.1 | SAMN05443668_104583 | SAMN05443668_114110 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SHN45261.1 | SHN29555.1 | SAMN05443668_111222 | SAMN05443668_104583 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | 0.664 |
SHN45261.1 | SHN45263.1 | SAMN05443668_111222 | SAMN05443668_111223 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.757 |
SHN45261.1 | SHN45265.1 | SAMN05443668_111222 | SAMN05443668_111224 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Ferredoxin. | 0.764 |
SHN45261.1 | SHN45267.1 | SAMN05443668_111222 | SAMN05443668_111225 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.786 |
SHN45261.1 | SHN45269.1 | SAMN05443668_111222 | SAMN05443668_111226 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Cytochrome P450. | 0.775 |
SHN45261.1 | SHN45271.1 | SAMN05443668_111222 | SAMN05443668_111227 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.754 |
SHN45261.1 | SHN45273.1 | SAMN05443668_111222 | SAMN05443668_111228 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Transcriptional regulator, TetR family. | 0.752 |
SHN45261.1 | SHN45277.1 | SAMN05443668_111222 | SAMN05443668_111230 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.752 |
SHN45261.1 | SHN46277.1 | SAMN05443668_111222 | SAMN05443668_114110 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.463 |
SHN45263.1 | SHN45261.1 | SAMN05443668_111223 | SAMN05443668_111222 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.757 |
SHN45263.1 | SHN45265.1 | SAMN05443668_111223 | SAMN05443668_111224 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Ferredoxin. | 0.773 |
SHN45263.1 | SHN45267.1 | SAMN05443668_111223 | SAMN05443668_111225 | Predicted metal-dependent hydrolase, TIM-barrel fold. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.776 |
SHN45263.1 | SHN45269.1 | SAMN05443668_111223 | SAMN05443668_111226 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Cytochrome P450. | 0.773 |
SHN45263.1 | SHN45271.1 | SAMN05443668_111223 | SAMN05443668_111227 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.773 |
SHN45263.1 | SHN45273.1 | SAMN05443668_111223 | SAMN05443668_111228 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Transcriptional regulator, TetR family. | 0.875 |
SHN45263.1 | SHN45277.1 | SAMN05443668_111223 | SAMN05443668_111230 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.831 |
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