Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM22446.1 | SHM27000.1 | SAMN05443668_10146 | SAMN05443668_101167 | Maltokinase. | Starch phosphorylase. | 0.829 |
SHM22446.1 | SHM27074.1 | SAMN05443668_10146 | SAMN05443668_101169 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.852 |
SHM22446.1 | SHM73486.1 | SAMN05443668_10146 | SAMN05443668_1011371 | Maltokinase. | Alpha-amylase. | 0.933 |
SHM22446.1 | SHN27042.1 | SAMN05443668_10146 | SAMN05443668_104327 | Maltokinase. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.868 |
SHM22446.1 | SHN45836.1 | SAMN05443668_10146 | SAMN05443668_11329 | Maltokinase. | Alpha-glucosidase. | 0.929 |
SHM22446.1 | SHN47452.1 | SAMN05443668_10146 | SAMN05443668_1248 | Maltokinase. | 4-alpha-glucanotransferase. | 0.885 |
SHM22446.1 | SHN48018.1 | SAMN05443668_10146 | SAMN05443668_13217 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.855 |
SHM22446.1 | SHN48024.1 | SAMN05443668_10146 | SAMN05443668_13223 | Maltokinase. | Glycosidase. | 0.933 |
SHM22446.1 | glgC | SAMN05443668_10146 | SAMN05443668_105158 | Maltokinase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.785 |
SHM26871.1 | SHM27000.1 | SAMN05443668_101164 | SAMN05443668_101167 | Maltokinase. | Starch phosphorylase. | 0.886 |
SHM26871.1 | SHM27074.1 | SAMN05443668_101164 | SAMN05443668_101169 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.890 |
SHM26871.1 | SHM73486.1 | SAMN05443668_101164 | SAMN05443668_1011371 | Maltokinase. | Alpha-amylase. | 0.933 |
SHM26871.1 | SHN27042.1 | SAMN05443668_101164 | SAMN05443668_104327 | Maltokinase. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.868 |
SHM26871.1 | SHN45836.1 | SAMN05443668_101164 | SAMN05443668_11329 | Maltokinase. | Alpha-glucosidase. | 0.992 |
SHM26871.1 | SHN47452.1 | SAMN05443668_101164 | SAMN05443668_1248 | Maltokinase. | 4-alpha-glucanotransferase. | 0.942 |
SHM26871.1 | SHN48018.1 | SAMN05443668_101164 | SAMN05443668_13217 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.900 |
SHM26871.1 | SHN48024.1 | SAMN05443668_101164 | SAMN05443668_13223 | Maltokinase. | Glycosidase. | 0.943 |
SHM26871.1 | glgC | SAMN05443668_101164 | SAMN05443668_105158 | Maltokinase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.785 |
SHM27000.1 | SHM22446.1 | SAMN05443668_101167 | SAMN05443668_10146 | Starch phosphorylase. | Maltokinase. | 0.829 |
SHM27000.1 | SHM26871.1 | SAMN05443668_101167 | SAMN05443668_101164 | Starch phosphorylase. | Maltokinase. | 0.886 |
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