STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN46319.1Right handed beta helix region. (436 aa)    
Predicted Functional Partners:
SHN21162.1
Protein of unknown function.
    
  0.754
SHN34428.1
Hypothetical protein.
    
 
 0.749
SHM28355.1
N-terminal domain of Peptidase_S41.
 
   0.719
SHN47841.1
Glycosyl transferase family 21.
 
  
 0.715
SHN48253.1
Glycosyl transferase family 21.
 
  
  0.701
SHN42715.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
 0.618
SHM87747.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
 
 
  0.580
SHN42529.1
Alpha-1,2-mannosyltransferase.
    
 
 0.542
SHN42753.1
PAP2 superfamily protein.
    
 
 0.542
SHN27688.1
Acyl carrier protein.
   
 
 0.532
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.