STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN46569.1Acyl-CoA dehydrogenase. (336 aa)    
Predicted Functional Partners:
SHN46568.1
Hypothetical protein.
     0.978
SHN46565.1
Acyl-CoA dehydrogenase.
 
     0.944
SHN46566.1
Acyl-CoA dehydrogenase.
     0.941
SHM27993.1
Electron transfer flavoprotein beta subunit.
 
 
 0.890
SHN46570.1
enoyl-CoA hydratase.
  
  0.841
SHM66402.1
Acyl-CoA dehydrogenase.
 
     0.825
SHN46563.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.824
SHM28028.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.816
SHN23712.1
Acyl-CoA dehydrogenase.
 
     0.809
SHN46573.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
   
  0.807
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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