Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN28653.1 | SHN46603.1 | SAMN05443668_104483 | SAMN05443668_116139 | Protein of unknown function. | Transcriptional regulator, TetR family. | 0.411 |
SHN32775.1 | SHN46603.1 | SAMN05443668_10579 | SAMN05443668_116139 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.447 |
SHN46172.1 | SHN46603.1 | SAMN05443668_11414 | SAMN05443668_116139 | Mg-chelatase subunit ChlD. | Transcriptional regulator, TetR family. | 0.418 |
SHN46599.1 | SHN46600.1 | SAMN05443668_116135 | SAMN05443668_116136 | fatty-acyl-CoA synthase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.738 |
SHN46599.1 | SHN46601.1 | SAMN05443668_116135 | SAMN05443668_116137 | fatty-acyl-CoA synthase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.651 |
SHN46599.1 | SHN46602.1 | SAMN05443668_116135 | SAMN05443668_116138 | fatty-acyl-CoA synthase. | Cytochrome P450, family 142, subfamily A, polypeptide 1. | 0.749 |
SHN46599.1 | SHN46603.1 | SAMN05443668_116135 | SAMN05443668_116139 | fatty-acyl-CoA synthase. | Transcriptional regulator, TetR family. | 0.536 |
SHN46600.1 | SHN46599.1 | SAMN05443668_116136 | SAMN05443668_116135 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | fatty-acyl-CoA synthase. | 0.738 |
SHN46600.1 | SHN46601.1 | SAMN05443668_116136 | SAMN05443668_116137 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.812 |
SHN46600.1 | SHN46602.1 | SAMN05443668_116136 | SAMN05443668_116138 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Cytochrome P450, family 142, subfamily A, polypeptide 1. | 0.766 |
SHN46600.1 | SHN46603.1 | SAMN05443668_116136 | SAMN05443668_116139 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Transcriptional regulator, TetR family. | 0.606 |
SHN46601.1 | SHN46599.1 | SAMN05443668_116137 | SAMN05443668_116135 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | fatty-acyl-CoA synthase. | 0.651 |
SHN46601.1 | SHN46600.1 | SAMN05443668_116137 | SAMN05443668_116136 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.812 |
SHN46601.1 | SHN46602.1 | SAMN05443668_116137 | SAMN05443668_116138 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Cytochrome P450, family 142, subfamily A, polypeptide 1. | 0.792 |
SHN46601.1 | SHN46603.1 | SAMN05443668_116137 | SAMN05443668_116139 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Transcriptional regulator, TetR family. | 0.631 |
SHN46602.1 | SHN46599.1 | SAMN05443668_116138 | SAMN05443668_116135 | Cytochrome P450, family 142, subfamily A, polypeptide 1. | fatty-acyl-CoA synthase. | 0.749 |
SHN46602.1 | SHN46600.1 | SAMN05443668_116138 | SAMN05443668_116136 | Cytochrome P450, family 142, subfamily A, polypeptide 1. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.766 |
SHN46602.1 | SHN46601.1 | SAMN05443668_116138 | SAMN05443668_116137 | Cytochrome P450, family 142, subfamily A, polypeptide 1. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.792 |
SHN46602.1 | SHN46603.1 | SAMN05443668_116138 | SAMN05443668_116139 | Cytochrome P450, family 142, subfamily A, polypeptide 1. | Transcriptional regulator, TetR family. | 0.631 |
SHN46603.1 | SHN28653.1 | SAMN05443668_116139 | SAMN05443668_104483 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.411 |
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