STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN46679.1Serine/threonine protein phosphatase PrpC. (308 aa)    
Predicted Functional Partners:
SHN47321.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.993
SHN46678.1
Serine/threonine-protein kinase PknG.
 
  0.968
SHN46680.1
Von Willebrand factor type A domain-containing protein.
 
     0.959
SHN46681.1
FHA domain-containing protein.
 
   
 0.941
SHN45829.1
Hypothetical protein.
   
 0.932
SHM41036.1
Serine/threonine protein kinase.
  
 0.928
SHN46800.1
Serine/threonine protein kinase.
  
 0.928
SHN44990.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.862
SHN45975.1
Nitric oxide synthase, oxygenase domain.
  
 0.797
SHN46899.1
Pyruvate dehydrogenase E1 component beta subunit.
   
 0.786
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.