Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN04069.1 | SHN26412.1 | SAMN05443668_102681 | SAMN05443668_104258 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.479 |
SHN04069.1 | SHN43517.1 | SAMN05443668_102681 | SAMN05443668_109208 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.674 |
SHN04069.1 | SHN46854.1 | SAMN05443668_102681 | SAMN05443668_11887 | Transcriptional regulator, XRE family with cupin sensor. | L-amino acid N-acyltransferase YncA. | 0.438 |
SHN26412.1 | SHN04069.1 | SAMN05443668_104258 | SAMN05443668_102681 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.479 |
SHN26412.1 | SHN43517.1 | SAMN05443668_104258 | SAMN05443668_109208 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.666 |
SHN26412.1 | SHN46854.1 | SAMN05443668_104258 | SAMN05443668_11887 | Transcriptional regulator, XRE family with cupin sensor. | L-amino acid N-acyltransferase YncA. | 0.438 |
SHN34788.1 | SHN46854.1 | SAMN05443668_105308 | SAMN05443668_11887 | Threonine dehydratase. | L-amino acid N-acyltransferase YncA. | 0.578 |
SHN39451.1 | SHN46854.1 | SAMN05443668_106285 | SAMN05443668_11887 | Urea carboxylase. | L-amino acid N-acyltransferase YncA. | 0.672 |
SHN39451.1 | argB | SAMN05443668_106285 | SAMN05443668_1118 | Urea carboxylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.638 |
SHN39451.1 | ureC | SAMN05443668_106285 | SAMN05443668_104479 | Urea carboxylase. | Urease. Metallo peptidase. MEROPS family M38. | 0.910 |
SHN43517.1 | SHN04069.1 | SAMN05443668_109208 | SAMN05443668_102681 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.674 |
SHN43517.1 | SHN26412.1 | SAMN05443668_109208 | SAMN05443668_104258 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.666 |
SHN43517.1 | SHN46854.1 | SAMN05443668_109208 | SAMN05443668_11887 | Transcriptional regulator, XRE family with cupin sensor. | L-amino acid N-acyltransferase YncA. | 0.449 |
SHN46852.1 | SHN46853.1 | SAMN05443668_11885 | SAMN05443668_11886 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.532 |
SHN46852.1 | SHN46854.1 | SAMN05443668_11885 | SAMN05443668_11887 | Hypothetical protein. | L-amino acid N-acyltransferase YncA. | 0.528 |
SHN46853.1 | SHN46852.1 | SAMN05443668_11886 | SAMN05443668_11885 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.532 |
SHN46853.1 | SHN46854.1 | SAMN05443668_11886 | SAMN05443668_11887 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | L-amino acid N-acyltransferase YncA. | 0.798 |
SHN46854.1 | SHN04069.1 | SAMN05443668_11887 | SAMN05443668_102681 | L-amino acid N-acyltransferase YncA. | Transcriptional regulator, XRE family with cupin sensor. | 0.438 |
SHN46854.1 | SHN26412.1 | SAMN05443668_11887 | SAMN05443668_104258 | L-amino acid N-acyltransferase YncA. | Transcriptional regulator, XRE family with cupin sensor. | 0.438 |
SHN46854.1 | SHN34788.1 | SAMN05443668_11887 | SAMN05443668_105308 | L-amino acid N-acyltransferase YncA. | Threonine dehydratase. | 0.578 |
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