Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM87085.1 | SHN47065.1 | SAMN05443668_10222 | SAMN05443668_12021 | DNA-binding transcriptional regulator, MarR family. | Probable blue pigment (indigoidine) exporter. | 0.779 |
SHN26910.1 | SHN47065.1 | SAMN05443668_104314 | SAMN05443668_12021 | Hypothetical protein. | Probable blue pigment (indigoidine) exporter. | 0.406 |
SHN47064.1 | SHN47065.1 | SAMN05443668_12020 | SAMN05443668_12021 | DNA-binding transcriptional regulator, MarR family. | Probable blue pigment (indigoidine) exporter. | 0.894 |
SHN47064.1 | SHN47066.1 | SAMN05443668_12020 | SAMN05443668_12022 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.433 |
SHN47065.1 | SHM87085.1 | SAMN05443668_12021 | SAMN05443668_10222 | Probable blue pigment (indigoidine) exporter. | DNA-binding transcriptional regulator, MarR family. | 0.779 |
SHN47065.1 | SHN26910.1 | SAMN05443668_12021 | SAMN05443668_104314 | Probable blue pigment (indigoidine) exporter. | Hypothetical protein. | 0.406 |
SHN47065.1 | SHN47064.1 | SAMN05443668_12021 | SAMN05443668_12020 | Probable blue pigment (indigoidine) exporter. | DNA-binding transcriptional regulator, MarR family. | 0.894 |
SHN47065.1 | SHN47066.1 | SAMN05443668_12021 | SAMN05443668_12022 | Probable blue pigment (indigoidine) exporter. | Hypothetical protein. | 0.581 |
SHN47066.1 | SHN47064.1 | SAMN05443668_12022 | SAMN05443668_12020 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.433 |
SHN47066.1 | SHN47065.1 | SAMN05443668_12022 | SAMN05443668_12021 | Hypothetical protein. | Probable blue pigment (indigoidine) exporter. | 0.581 |