STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN47251.1Pimeloyl-ACP methyl ester carboxylesterase. (334 aa)    
Predicted Functional Partners:
SHN47252.1
Hypothetical protein.
       0.757
SHN47253.1
Clp amino terminal domain-containing protein, pathogenicity island component.
       0.741
SHN47250.1
Transcriptional regulator, TetR family.
 
     0.624
SHN39914.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
    
  0.591
SHN45253.1
ABC-type branched-chain amino acid transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.591
SHM64075.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.589
SHN16755.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.589
SHN75724.1
ABC-type branched-chain amino acid transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.589
SHN27321.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.584
SHN48082.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.527
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.