STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN47433.1Amino acid ABC transporter ATP-binding protein, PAAT family. (247 aa)    
Predicted Functional Partners:
SHN47432.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SHN74843.1
Polar amino acid transport system permease protein.
 0.997
SHN47431.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.997
SHM38567.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.988
SHN46326.1
Glutamate transport system permease protein.
 0.982
SHM44781.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.981
SHN75560.1
Glutamate transport system permease protein.
 0.981
SHM44822.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.977
SHN75555.1
Glutamate transport system permease protein.
 0.977
SHN46327.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.977
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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