STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN47971.1Acetyltransferase (GNAT) family protein. (327 aa)    
Predicted Functional Partners:
SHM25446.1
L-aminopeptidase/D-esterase.
  
 
  0.729
SHN44005.1
Putative pantetheine hydrolase.
  
 
  0.712
SHN39451.1
Urea carboxylase.
   
  0.672
SHN38866.1
Cupin domain-containing protein.
  
  
  0.648
SHN75643.1
Butirosin biosynthesis protein H, N-terminal.
  
     0.597
SHN34788.1
Threonine dehydratase.
    
  0.578
SHN47970.1
Protein of unknown function.
       0.557
SHN14035.1
DDE superfamily endonuclease.
 
     0.468
SHM25770.1
Protein of unknown function.
  
 
   0.458
SHN20507.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.