STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN47996.1Predicted dehydrogenase. (349 aa)    
Predicted Functional Partners:
SHN47995.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.773
SHM57829.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.759
SHN46191.1
2-keto-myo-inositol dehydratase.
 
 
 0.752
SHN40033.1
Predicted dehydrogenase.
  
     0.736
SHN47763.1
Sugar phosphate isomerase/epimerase.
  
 
 0.641
SHN46190.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
  
 0.612
SHN39717.1
Semialdehyde dehydrogenase, NAD binding domain.
  
 
  0.590
SHN46182.1
Predicted dehydrogenase.
  
     0.584
SHM92627.1
Hypothetical protein.
  
 
  0.581
SHN47583.1
Predicted dehydrogenase.
  
     0.580
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.