STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIZ43704.1Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. (642 aa)    
Predicted Functional Partners:
AIZ41497.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.929
AIZ41496.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.928
AIZ41749.1
VCBS protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.731
AIZ41745.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
AIZ40161.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.707
AIZ41750.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
AIZ42422.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
AIZ43443.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
AIZ43445.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
AIZ41523.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.658
Your Current Organism:
Cellulophaga baltica
NCBI taxonomy Id: 1348584
Other names: C. baltica 18, Cellulophaga baltica 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.