STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001591625_03805Unannotated protein. (92 aa)    
Predicted Functional Partners:
GCA_001591625_03045
Unannotated protein.
  
    0.776
GCA_001591625_03209
Unannotated protein.
  
     0.771
GCA_001591625_00862
Unannotated protein.
  
     0.770
GCA_001591625_02524
Unannotated protein.
  
     0.770
GCA_001591625_01849
Unannotated protein.
  
     0.766
GCA_001591625_02316
Unannotated protein.
  
     0.764
GCA_001591625_03051
Unannotated protein.
  
     0.760
GCA_001591625_00164
Unannotated protein.
  
     0.752
GCA_001591625_01851
Unannotated protein.
  
     0.741
GCA_001591625_00470
Unannotated protein.
  
     0.735
Your Current Organism:
Bacillus fastidiosus
NCBI taxonomy Id: 1348628
Other names: B. fastidiosus NBRC 101226, Bacillus fastidiosus NBRC 101226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.