STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RU87_GL000274Unannotated protein. (336 aa)    
Predicted Functional Partners:
RU87_GL000275
Unannotated protein.
 
 
 0.997
RU87_GL000273
Unannotated protein.
 
 
 0.997
RU87_GL000278
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.972
RU87_GL000276
Unannotated protein.
 
  
 0.952
RU87_GL000277
Unannotated protein.
 
    0.925
RU87_GL001444
Unannotated protein.
    
  0.720
RU87_GL000952
Unannotated protein.
   
 
 0.602
RU87_GL001026
Unannotated protein.
   
 
 0.602
RU87_GL001540
Unannotated protein.
   
 
 0.602
RU87_GL001613
Unannotated protein.
   
 
 0.602
Your Current Organism:
Lactococcus plantarum
NCBI taxonomy Id: 1348632
Other names: L. plantarum NBRC 100936, Lactococcus plantarum NBRC 100936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.