STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1M56_18260Unannotated protein. (559 aa)    
Predicted Functional Partners:
gspC
Unannotated protein.
 
 
 0.973
C1M56_18270
Unannotated protein.
 
  
 0.952
C1M56_18250
Unannotated protein.
 
 
 0.951
C1M56_18245
Unannotated protein.
 
  
 0.925
C1M56_18240
Unannotated protein.
 
  
 0.918
C1M56_18255
Unannotated protein.
 
  
 0.918
C1M56_18235
Unannotated protein.
 
  
 0.891
GCA_000740015_00583
Unannotated protein.
 
  
 0.889
GCA_000740015_00578
Unannotated protein.
 
  
 0.864
C1M56_18215
Unannotated protein.
 
     0.851
Your Current Organism:
Vibrio diazotrophicus
NCBI taxonomy Id: 1348635
Other names: V. diazotrophicus NBRC 103148, Vibrio diazotrophicus NBRC 103148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.