STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1M56_14090Unannotated protein. (293 aa)    
Predicted Functional Partners:
ugpE
Unannotated protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.996
C1M56_14095
Unannotated protein.
 
 0.992
ugpC
Unannotated protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.966
C1M56_16035
Unannotated protein.
 
 0.957
C1M56_11450
Unannotated protein.
 
 0.947
GCA_000740015_02529
Unannotated protein.
 
 0.947
C1M56_16975
Unannotated protein.
 
 0.943
C1M56_13070
Unannotated protein.
 
 0.943
GCA_000740015_00664
Unannotated protein.
 
 0.942
GCA_000740015_02650
Unannotated protein.
 
 0.941
Your Current Organism:
Vibrio diazotrophicus
NCBI taxonomy Id: 1348635
Other names: V. diazotrophicus NBRC 103148, Vibrio diazotrophicus NBRC 103148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.