STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1M56_04280Unannotated protein. (511 aa)    
Predicted Functional Partners:
GCA_000740015_00397
Unannotated protein.
 
 0.999
C1M56_12975
Unannotated protein.
 
 0.999
C1M56_06805
Unannotated protein.
 
 0.999
C1M56_04230
Unannotated protein.
 
 0.999
C1M56_13180
Unannotated protein.
  
 0.989
C1M56_05050
Unannotated protein.
 
 0.989
GCA_000740015_00055
Unannotated protein.
 
 0.988
GCA_000740015_01818
Unannotated protein.
  
 0.987
C1M56_10265
Unannotated protein.
  
 0.982
C1M56_06040
Unannotated protein.
 
 0.981
Your Current Organism:
Vibrio diazotrophicus
NCBI taxonomy Id: 1348635
Other names: V. diazotrophicus NBRC 103148, Vibrio diazotrophicus NBRC 103148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.