STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570765_02768Unannotated protein. (198 aa)    
Predicted Functional Partners:
GCA_001570765_02769
Unannotated protein.
 
 
 0.982
GCA_001570765_03479
Unannotated protein.
 
 
 0.919
GCA_001570765_05004
Unannotated protein.
 
 
 0.904
GCA_001570765_02771
Unannotated protein.
 
   
 0.836
GCA_001570765_03557
Unannotated protein.
     
 0.828
GCA_001570765_03730
Unannotated protein.
     
 0.825
GCA_001570765_02770
Unannotated protein.
       0.781
GCA_001570765_02772
Unannotated protein.
       0.779
GCA_001570765_03480
Unannotated protein.
  
  
 
0.776
GCA_001570765_05005
Unannotated protein.
  
     0.774
Your Current Organism:
Nocardiopsis listeri
NCBI taxonomy Id: 1348637
Other names: N. listeri NBRC 13360, Nocardiopsis listeri NBRC 13360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.