STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHK89080.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
KHK89079.1
F420-dependent NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.733
KHK90734.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
KHK92872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.622
KHK92388.1
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.564
KHK91348.1
2-phospho-L-lactate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.542
KHK91351.1
2-phospho-L-lactate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.526
KHK91349.1
Gamma-glutamyl ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.523
KHK89081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
KHK90739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
KHK92508.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.490
Your Current Organism:
Novosphingobium malaysiense
NCBI taxonomy Id: 1348853
Other names: DSM 27798, MCCC 1A00645, N. malaysiense, NBRC 109947, Novosphingobium malaysiense Lee et al. 2014, Novosphingobium sp. 273, strain MUSC 273
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.