STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC95769.14-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. (72 aa)    
Predicted Functional Partners:
KIC95771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.921
KIC95770.1
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.822
KIC95772.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
KIC95773.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.706
KIC95768.1
Lipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.
       0.693
KIC93412.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.542
KIC95767.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
KIC95873.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
KIC94078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.410
Your Current Organism:
Flavihumibacter solisilvae
NCBI taxonomy Id: 1349421
Other names: F. solisilvae, Flavihumibacter solisilvae Lee et al. 2014 emend. Hahnke et al. 2016, Flavihumibacter sp. 3_3, JCM 19891, KACC 17917, strain 3-3, strain 3_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.