STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC94267.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
KIC94261.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.989
KIC94268.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.987
KIC94260.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.985
KIC95920.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.935
KIC95918.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.885
KIC94244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.879
KIC94269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.852
KIC94262.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.847
KIC94423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.674
KIC94270.1
2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.655
Your Current Organism:
Flavihumibacter solisilvae
NCBI taxonomy Id: 1349421
Other names: F. solisilvae, Flavihumibacter solisilvae Lee et al. 2014 emend. Hahnke et al. 2016, Flavihumibacter sp. 3_3, JCM 19891, KACC 17917, strain 3-3, strain 3_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.