STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC93890.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)    
Predicted Functional Partners:
KIC95706.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.956
KIC93138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.925
KIC95690.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.839
KIC94813.1
RNA polymerase sigma54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.797
KIC96327.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.793
KIC93795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.792
KIC93793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.789
KIC96325.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.743
KIC94677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.734
KIC95572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.671
Your Current Organism:
Flavihumibacter solisilvae
NCBI taxonomy Id: 1349421
Other names: F. solisilvae, Flavihumibacter solisilvae Lee et al. 2014 emend. Hahnke et al. 2016, Flavihumibacter sp. 3_3, JCM 19891, KACC 17917, strain 3-3, strain 3_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.