STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC93729.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)    
Predicted Functional Partners:
KIC95690.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.986
KIC95706.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.965
KIC95572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.937
KIC96029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.911
KIC94517.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.908
KIC94816.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.893
KIC94590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.891
KIC95999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.882
KIC93705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.869
KIC93169.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.863
Your Current Organism:
Flavihumibacter solisilvae
NCBI taxonomy Id: 1349421
Other names: F. solisilvae, Flavihumibacter solisilvae Lee et al. 2014 emend. Hahnke et al. 2016, Flavihumibacter sp. 3_3, JCM 19891, KACC 17917, strain 3-3, strain 3_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.