STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC92976.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
KIC92977.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.938
KIC92975.1
Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
KIC92974.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.707
KIC92980.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.681
KIC92979.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.662
KIC92971.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
KIC92978.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
KIC93051.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.550
KIC92706.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
KIC92972.1
Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.534
Your Current Organism:
Flavihumibacter solisilvae
NCBI taxonomy Id: 1349421
Other names: F. solisilvae, Flavihumibacter solisilvae Lee et al. 2014 emend. Hahnke et al. 2016, Flavihumibacter sp. 3_3, JCM 19891, KACC 17917, strain 3-3, strain 3_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.