STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKP88233.1Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
OKP89391.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.891
OKP88232.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.763
OKP88917.1
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.743
A3848_10865
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.712
OKP90419.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OKP93914.1
Glycoside hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.672
OKP92983.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.672
OKP91353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.672
OKP90759.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.672
OKP86567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.672
Your Current Organism:
Paenibacillus sp. P32E
NCBI taxonomy Id: 1349434
Other names: P. sp. P32E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.