STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571145_03217Unannotated protein. (178 aa)    
Predicted Functional Partners:
GCA_001571145_03218
Unannotated protein.
 
     0.806
GCA_001571145_03219
Unannotated protein.
       0.773
GCA_001571145_03216
Unannotated protein.
 
     0.636
GCA_001571145_01471
Unannotated protein.
  
     0.614
GCA_001571145_04351
Unannotated protein.
  
     0.558
GCA_001571145_01329
Unannotated protein.
  
     0.546
GCA_001571145_04349
Unannotated protein.
  
     0.527
GCA_001571145_01327
Unannotated protein.
  
     0.522
GCA_001571145_04350
Unannotated protein.
  
     0.505
GCA_001571145_04348
Unannotated protein.
  
     0.492
Your Current Organism:
Hydrogenophaga flava
NCBI taxonomy Id: 1349752
Other names: H. flava NBRC 102514, Hydrogenophaga flava NBRC 102514
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.