STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592225_00124Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_001592225_00125
Unannotated protein.
 
 
 0.990
GCA_001592225_00123
Unannotated protein.
 
 
 0.986
GCA_001592225_00122
Unannotated protein.
 
    0.937
GCA_001592225_00088
Unannotated protein.
 
 
 0.925
GCA_001592225_02833
Unannotated protein.
 
 
 0.886
GCA_001592225_00121
Unannotated protein.
 
    0.884
GCA_001592225_01748
Unannotated protein.
 
 
 0.882
GCA_001592225_02832
Unannotated protein.
 
 
 0.882
GCA_001592225_00090
Unannotated protein.
 
 
 0.879
GCA_001592225_01747
Unannotated protein.
 
 
 0.865
Your Current Organism:
Castellaniella caeni
NCBI taxonomy Id: 1349760
Other names: C. caeni NBRC 101664, Castellaniella caeni NBRC 101664
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.