STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592225_00869Unannotated protein. (86 aa)    
Predicted Functional Partners:
GCA_001592225_02710
Unannotated protein.
 
     0.597
GCA_001592225_00092
Unannotated protein.
  
     0.581
GCA_001592225_00951
Unannotated protein.
   
    0.574
GCA_001592225_00868
Unannotated protein.
       0.524
GCA_001592225_02711
Unannotated protein.
 
     0.503
GCA_001592225_02423
Unannotated protein.
 
     0.474
GCA_001592225_00821
Unannotated protein.
  
     0.454
GCA_001592225_00867
Unannotated protein.
       0.434
GCA_001592225_00870
Unannotated protein.
       0.432
GCA_001592225_00871
Unannotated protein.
       0.432
Your Current Organism:
Castellaniella caeni
NCBI taxonomy Id: 1349760
Other names: C. caeni NBRC 101664, Castellaniella caeni NBRC 101664
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.