STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592225_02352Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_001592225_02353
Unannotated protein.
 
 0.999
GCA_001592225_00617
Unannotated protein.
 
 0.994
GCA_001592225_01285
Unannotated protein.
 
  
 0.981
GCA_001592225_02937
Unannotated protein.
 
 0.963
GCA_001592225_00620
Unannotated protein.
 
 
 0.950
GCA_001592225_02936
Unannotated protein.
 
 
 0.848
GCA_001592225_00668
Unannotated protein.
 
 
 0.815
GCA_001592225_00618
Unannotated protein.
 
  
 0.798
GCA_001592225_02351
Unannotated protein.
       0.766
GCA_001592225_02215
Unannotated protein.
 
  
 0.708
Your Current Organism:
Castellaniella caeni
NCBI taxonomy Id: 1349760
Other names: C. caeni NBRC 101664, Castellaniella caeni NBRC 101664
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.