STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813345_01812Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_000813345_02181
Unannotated protein.
  
  
  0.760
GCA_000813345_02268
Unannotated protein.
     
 0.721
GCA_000813345_01633
Unannotated protein.
    
   0.719
GCA_000813345_01312
Unannotated protein.
  
 
  0.698
GCA_000813345_01883
Unannotated protein.
     
 0.687
GCA_000813345_02224
Unannotated protein.
  
     0.676
GCA_000813345_02579
Unannotated protein.
  
  
  0.673
GCA_000813345_00855
Unannotated protein.
  
     0.657
GCA_000813345_01811
Unannotated protein.
       0.651
GCA_000813345_02287
Unannotated protein.
  
     0.609
Your Current Organism:
Sulfurospirillum arsenophilum
NCBI taxonomy Id: 1349789
Other names: S. arsenophilum NBRC 109478, Sulfurospirillum arsenophilum NBRC 109478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.