STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592305_00443Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_001592305_04733
Unannotated protein.
   
 0.953
GCA_001592305_03563
Unannotated protein.
   
 0.907
GCA_001592305_01021
Unannotated protein.
   
 0.866
GCA_001592305_04215
Unannotated protein.
   
 0.866
GCA_001592305_04671
Unannotated protein.
 
 0.833
GCA_001592305_03806
Unannotated protein.
  
 0.813
GCA_001592305_04743
Unannotated protein.
   
 0.791
GCA_001592305_02310
Unannotated protein.
  
 0.780
GCA_001592305_00661
Unannotated protein.
   
 0.779
GCA_001592305_02931
Unannotated protein.
   
 0.779
Your Current Organism:
Hydrogenophaga taeniospiralis
NCBI taxonomy Id: 1349793
Other names: H. taeniospiralis NBRC 102512, Hydrogenophaga taeniospiralis NBRC 102512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.