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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traLSodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
ecsA_3
Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
ydeA
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.768
AOM17128.1
Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.761
AOM14896.1
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.637
AOM16804.1
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.637
TelA
Tellurite resistance protein TelA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TelA family.
      
 0.564
uvrC_1
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
    0.561
AOM17113.1
Zeta toxin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.524
fbp
Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
lepB
Peptidase S24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
      
 0.410
Your Current Organism:
Enterococcus faecium
NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium
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